Proceedings of BioNLP 2014

Kevin Cohen
Dina Demner-Fushman
Sophia Ananiadou
Jun-ichi Tsujii

Full proceedings volume (PDF)
Schedule and author index (HTML)
Bibliography (BibTeX)
Live website

Front matter [pdf] [bib] pages
Natural Language Processing Methods for Enhancing Geographic Metadata for Phylogeography of Zoonotic Viruses
Tasnia Tahsin, Robert Rivera, Rachel Beard, Rob Lauder, Davy Weissenbacher, Matthew Scotch, Garrick Wallstrom and Graciela Gonzalez
[pdf] [bib]
pp. 1–9
Temporal Expression Recognition for Cell Cycle Phase Concepts in Biomedical Literature
Negacy Hailu, Natalya Panteleyeva and Kevin Cohen
[pdf] [bib]
pp. 10–18
Classifying Negative Findings in Biomedical Publications
Bei Yu and Daniele Fanelli
[pdf] [bib]
pp. 19–23
Automated Disease Normalization with Low Rank Approximations
Robert Leaman and Zhiyong Lu
[pdf] [bib]
pp. 24–28
Decomposing Consumer Health Questions
Kirk Roberts, Halil Kilicoglu, Marcelo Fiszman and Dina Demner-Fushman
[pdf] [bib]
pp. 29–37
Detecting Health Related Discussions in Everyday Telephone Conversations for Studying Medical Events in the Lives of Older Adults
Golnar Sheikhshab, Izhak Shafran and Jeffrey Kaye
[pdf] [bib]
pp. 38–44
Coreference Resolution for Structured Drug Product Labels
Halil Kilicoglu and Dina Demner-Fushman
[pdf] [bib]
pp. 45–53
Generating Patient Problem Lists from the ShARe Corpus using SNOMED CT/SNOMED CT CORE Problem List
Danielle Mowery, Mindy Ross, Sumithra Velupillai, Stephane Meystre, Janyce Wiebe and Wendy Chapman
[pdf] [bib]
pp. 54–58
A System for Predicting ICD-10-PCS Codes from Electronic Health Records
Michael Subotin and Anthony Davis
[pdf] [bib]
pp. 59–67
Structuring Operative Notes using Active Learning
Kirk Roberts, Sanda Harabagiu and Michael Skinner
[pdf] [bib]
pp. 68–76
Chunking Clinical Text Containing Non-Canonical Language
Aleksandar Savkov, John Carroll and Jackie Cassell
[pdf] [bib]
pp. 77–82
Decision Style in a Clinical Reasoning Corpus
Limor Hochberg, Cecilia Ovesdotter Alm, Esa M. Rantanen, Caroline M. DeLong and Anne Haake
[pdf] [bib]
pp. 83–87
Temporal Expressions in Swedish Medical Text – A Pilot Study
Sumithra Velupillai
[pdf] [bib]
pp. 88–92
A repository of semantic types in the MIMIC II database clinical notes
Richard Osborne, Alan Aronson and Kevin Cohen
[pdf] [bib]
pp. 93–97
Extracting drug indications and adverse drug reactions from Spanish health social media
Isabel Segura-Bedmar, Santiago de la Peña González and Paloma Martínez
[pdf] [bib]
pp. 98–106
Symptom extraction issue
Laure Martin, Delphine Battistelli and Thierry Charnois
[pdf] [bib]
pp. 107–111
Seeking Informativeness in Literature Based Discovery
Judita Preiss
[pdf] [bib]
pp. 112–117
Towards Gene Recognition from Rare and Ambiguous Abbreviations using a Filtering Approach
Matthias Hartung, Roman Klinger, Matthias Zwick and Philipp Cimiano
[pdf] [bib]
pp. 118–127
FFTM: A Fuzzy Feature Transformation Method for Medical Documents
Amir Karami and Aryya Gangopadhyay
[pdf] [bib]
pp. 128–133
Using statistical parsing to detect agrammatic aphasia
Kathleen C. Fraser, Graeme Hirst, Jed A. Meltzer, Jennifer E. Mack and Cynthia K. Thompson
[pdf] [bib]
pp. 134–142

Last modified on June 3, 2014, 10:20 a.m.